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Full Version: Fragile DNA Enables New Adaptations to Evolve Quickly
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If highly repetitive gene-regulating sequences in DNA are easily lost, then that may explain why some adaptations evolve quickly and repeatedly.
https://www.quantamagazine.org/fragile-d...-20190205/

INTRO: Evolutionary biologists have puzzled over why nature, with vast genetic resources at its disposal, sometimes seems stuck in a rut. Against the odds, separate species and populations independently evolve the same solutions to life’s challenges, and the same genes are recruited to mutate and enable certain adaptations again and again. Now researchers at Stanford University think they have found part of the answer, at least for the fish called three-spine sticklebacks (Gasterosteus aculeatus).

According to a recent study described in Science, the stickleback’s DNA has fragile “hot spots” that are predisposed to break and mutate more often, with an accompanying loss of traits. The result is that these fish rapidly evolve the same adaptation — the loss of a pair of fins on their pelvis — repeatedly.

The discovery serves as a reminder that when looking at how mutations help with “survival of the fittest,” it’s also important to consider why those mutations occurred — “arrival of the fittest,” according to David Kingsley, the evolutionary geneticist whose lab conducted the study.

This work is “raising the specter that not all sites in the genome are equal. Some places are going to be more prone to mutation, and those may be meaningful for the repeated adaptation of populations,” said Sean B. Carroll, professor of biology at the University of Maryland and the director of science education at the Howard Hughes Medical Institute, who was not involved in the study. “I think that’s fascinating.”

MORE: https://www.quantamagazine.org/fragile-d...-20190205/
Could the stickleback have had to evolve the fragile hot spots first?
(Feb 7, 2019 01:42 AM)Zinjanthropos Wrote: [ -> ]Could the stickleback have had to evolve the fragile hot spots first?


Yes, that seems to be case for now due to the earlier saltwater sticklebacks possessing the unstable genome areas of the landlocked version (albeit the GT iterations are different in quantity and position -- "fine adjustments").

The fragility causing both pelvic-fin presence and its absence stems from a varying amount of "exceptionally long strings of alternating guanine and tyrosine DNA bases (GT repeats)". They also discovered scores of other regions with GT duplicate patterns in the ancestral (marine version) of sticklebacks, which might likewise be fragile, since those are frequently missing (altogether or only in number/location/sequence?) from the mutated freshwater descendants. But those other brittle hotspots are not necessarily connected to whether the pelvic-fin is "to be or not to be".

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